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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs1602456 chr3:56541253 G/A 6.01E-5 488 16.67 12.65 8.97 KM Plot
THCA rs1608695 chr1:48774515 C/A 7.69E-5 489 17.83 14.78 14.78 KM Plot
THCA rs1608898 chr7:64248698 A/G 8.13E-9 474 12.6 14.65 16.63 KM Plot
THCA rs1609292 chr9:94725872 C/T 4.7E-5 490 11.67 15.17 16.73 KM Plot
THCA rs1609806 chr13:29201398 G/A 2.1E-13 483 16.8 13.42 8.12 KM Plot
THCA rs1615035 chr18:21178845 A/G 3.22E-5 473 15.83 16.37 14.27 KM Plot
THCA rs1616670 chr18:21168691 T/G 1.59E-6 484 15.63 16.92 14.3 KM Plot
THCA rs1617906 chr1:16322598 G/A 1.29E-11 487 15.2 18.28 12.63 KM Plot
THCA rs1620047 chr18:21168289 T/C 1.57E-6 486 15.65 16.87 14.3 KM Plot
THCA rs1625706 chr10:7884078 G/A 3.84E-5 488 15.03 17 17.77 KM Plot
THCA rs1625951 chr6:119163357 T/C 0.000259 485 16.27 14.27 21.77 KM Plot
THCA rs1630202 chr6:119162869 C/T 0.000278 484 16.23 14.27 21.77 KM Plot
THCA rs1632089 chr14:20383582 C/T 3.33E-6 490 7.17 18.43 15.65 KM Plot
THCA rs1644406 chr10:12878896 T/C 0 483 15.7 17.78 13.07 KM Plot
THCA rs164774 chr1:4651230 A/C 0.000313 484 11.28 15 16.07 KM Plot